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Suinesiaputra, A. and Ablin, P. and Alba, X. and Alessandrini, M. and Allen, J. and Bai, W. and Cimen, S. and Claes, P. and Cowan, B. R. and D'hooge, J. and Duchateau, N. and Ehrhardt, J. and Frangi, A. F. and Gooya, A. and Grau, V. and Lekadir, K. and Lu, A. and Mukhopadhyay, A. and Oksuz, Ilkay and Pennec, X. and Pereanez, M. and Pinto, C. and Piras, P. and Rohe, M. M. and Rueckert, D. and Sermesant, M. and Siddiqi, K. and Tabassian, M. and Teresi, L. and Tsaftaris, S. A. and Wilms, M. and Young, A. A. and Zhang, X. and Medrano-Gracia, P. Statistical shape modeling of the left ventricle: myocardial infarct classification challenge. IEEE Journal of Biomedical and Health Informatics, PP (99). p. 1. ISSN 2168-2194 (In Press) (2017)

Onofrey, John A. and Oksuz, Ilkay and Sarkar, Saradwata and Venkataraman, Rajesh and Staib, Lawrence H. and Papademetris, Xenophon MRI-TRUS Image Synthesis with Application to Image-Guided Prostate Intervention. In: Simulation and Synthesis in Medical Imaging. First International Workshop, SASHIMI 2016, Held in Conjunction with MICCAI 2016, Athens, Greece, October 21, 2016, Proceedings. Lecture Notes in Computer Science (9968). Springer International Publishing, pp. 157-166. ISBN 978-3-319-46630-9 (2016)

Mukhopadhyay, Anirban and Oksuz, Ilkay and Tsaftaris, Sotirios A. Supervised Learning of Functional Maps for Infarct Classification. In: Statistical Atlases and Computational Models of the Heart. Imaging and Modelling Challenges. Lecture Notes in Computer Science, 9534 . Springer, pp. 162-170. ISBN 978-3-319-28711-9 (2016)

Mukhopadhyay, Anirban and Oksuz, Ilkay and Bevilacqua, Marco and Tsaftaris, Sotirios A. Data-driven feature learning for myocardial segmentation of CP-BOLD MRI. In: Functional imaging and modeling of the heart. Springer, pp. 189-197. ISBN 978-3-319-20309-6 (2015)

Mukhopadhyay, Anirban and Bevilacqua, Marco and Oksuz, Ilkay and Dharmakumar, Rohan and Tsaftaris, Sotirios A. Data Driven Feature Learning for Representation of Myocardial BOLD MR Images. In: ISMRM 23st Annual Meeting, 30 May - 5 Jun 2015, Toronto, Ontario, Canada (Unpublished) (2015)

Oksuz, Ilkay and Mukhopadhyay, Anirban and Bevilacqua, Marco and Yang, Hsin-Jung and Dharmakumar, Rohan and Tsaftaris, Sotirios A. Effect of BOLD Contrast on Myocardial Registration. In: ISMRM 23st Annual Meeting, 30 May - 5 Jun 2015, Toronto, Ontario, Canada (Unpublished) (2015)

Oksuz, Ilkay and Mukhopadhyay, Anirban and Bevilacqua, Marco and Dharmakumar, Rohan and Tsaftaris, Sotirios A. Dictionary Learning Based Image Descriptor for Myocardial Registration of CP-BOLD MR. In: Medical Image Computing and Computer-Assisted Intervention. MICCAI 2015. Lecture Notes in Computer Science, 9350 . Springer, pp. 205-213. ISBN 978-3-319-24570-6 (2015)

Mukhopadhyay, Anirban and Oksuz, Ilkay and Bevilacqua, Marco and Dharmakumar, Rohan and Tsaftaris, Sotirios A. Unsupervised Myocardial Segmentation for Cardiac MRI. In: Medical Image Computing and Computer-Assisted Intervention. MICCAI 2015. Lecture Notes in Computer Science, 9351 . Springer, pp. 12-20. ISBN 978-3-319-24573-7 (2015)

Rudyanto, Rina D. and Kerkstra, Sjoerd and van Rikxoort, Eva M. and Fetita, Catalin and Brillet, Pierre-Yves and Lefevre, Christophe and Xue, Wenzhe and Zhu, Xiangjun and Liang, Jianming and Oksuz, Ilkay and Ünay, Devrim and Kadipasaoglu, Kamuran and Estépar, Raúl San José and Ross, James C. and Washko, George R. and Prieto, Juan-Carlos and Hoyos, Marcela Hernández and Orkisz, Maciej and Meine, Hans and Hüllebrand, Markus and Stöcker, Christina and Mir, Fernando Lopez and Naranjo, Valery and Villanueva, Eliseo and Staring, Marius and Xiao, Changyan and Stoel, Berend C. and Fabijanska, Anna and Smistad, Erik and Elster, Anne C. and Lindseth, Frank and Foruzan, Amir Hossein and Kiros, Ryan and Popuri, Karteek and Cobzas, Dana and Jimenez-Carretero, Daniel and Santos, Andres and Ledesma-Carbayo, Maria J. and Helmberger, Michael and Urschler, Martin and Pienn, Michael and Bosboom, Dennis G.H. and Campo, Arantza and Prokop, Mathias and de Jong, Pim A. and Ortiz-de-Solorzano, Carlos and Muñoz-Barrutia, Arrate and van Ginneken, Bram Comparing algorithms for automated vessel segmentation in computed tomography scans of the lung: the VESSEL12 study. Medical Image Analysis, 18 (7). pp. 1217-1232. ISSN 1361-8415 (2014)

Kirişli, H.A. and Schaap, M. and Metz, C.T. and Dharampal, A.S. and Meijboom, W.B. and Papadopoulou, S.L. and Dedic, A. and Nieman, K. and de Graaf, M.A. and Meijs, M.F.L. and Cramer, M.J. and Broersen, A. and Cetin, S. and Eslami, A. and Flórez-Valencia, L. and Lor, K.L. and Matuszewski, B. and Melki, I. and Mohr, B. and Oksuz, Ilkay and Shahzad, R. and Wang, C. and Kitslaar, P.H. and Unal, G. and Katouzian, A. and Orkisz, Maciej and Chen, C.M. and Precioso, F. and Najman, L. and Masood, S. and Unay, Devrim and van Vliet, L. and Moreno, R. and Goldenberg, R. and Vuçini, E. and Krestin, G.P. and Niessen, W.J. and van Walsum, T. Standardized evaluation framework for evaluating coronary artery stenosis detection, stenosis quantification and lumen segmentation algorithms in computed tomography angiography. Medical Image Analysis, 17 (8). pp. 859-876. ISSN 1361-8415 (2013)

Unay, Devrim and Harmankaya, Ibrahim and Oksuz, Ilkay and Kadipasaoglu, Kamuran and Cubuk, Rahmi and Celik, Levent Automated aortic supravalvular sinus detection in conventional computed tomography image. In: Proceedings of the 21st Signal Processing and Communications Applications Conference (SIU). IEEE, pp. 1-4. ISBN 978-1-4673-5561-2 (2013)

Oksuz, Ilkay and Unay, Devrim and Kadipasaoglu, Kamuran Region growing on frangi vesselness values in 3-D CTA data. In: Proceedings of the 21st Signal Processing and Communications Applications Conference (SIU). IEEE, pp. 1-4. ISBN 978-1-4673-5561-2 (2013)

Bevilacqua, Marco and Mukhopadhyay, Anirban and Oksuz, Ilkay and Rusu, Cristian and Dharmakumar, Rohan and Tsaftaris, Sotirios A. Dictionary-based Support Vector Machines for Unsupervised Ischemia Detection at Rest with CP-BOLD Cardiac MRI. In: ISMRM 23st Annual Meeting, 30 May - 5 Jun 2015, Toronto, Ontario, Canada (Unpublished)